Screening of Reverse Transcriptase Inhibitor from Moringa oleifera Bioactive Compound through In Silico Study Againts HIV-1

https://doi.org/10.24036/sainstek/vol1-iss02/9

Authors

  • Ahmad Affan Ali Murtadlo Computational Virology Research Unit, Molecular Biology and Genetics Division, Generasi Biologi Indonesia Foundation, Gresik Indonesia.
  • Sri Wahyuningsih Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia.
  • Dora Dayu Rahma Turista Educational Biology Department, Faculty of Teacher Training and Education, Mulawarman University, Samarinda, Indonesia.
  • Arbi Wiguna Zoology Division, Generasi Biologi Indonesia Foundation, Gresik, Indonesia.
  • Arini Wijayanti Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, United States.
  • Yuanita Rachmawati Department of Biology, Faculty of Science and Technology, UIN Sunan Ampel Surabaya, Surabaya, Indonesia.
  • Alyaa Farrah Dibha Chemistry Department, Faculty of Mathematics and Natural Sciences, Brawijaya University, Malang, Indonesia.
  • Thobib Hasan Department of Biology, Faculty of Mathematics and Natural Sciences, IPB University, Bogor, Indonesia.
  • Renadya Maulani Wijaya Department of Bioinformatics, School of Life Sciences, Indonesia International Institute for Life-Sciences, East Jakarta, Indonesia.
  • Muhammad Aldino Hafidzhah Department of Bioinformatics, School of Life Sciences, Indonesia International Institute for Life-Sciences, East Jakarta, Indonesia.
  • Santika Lusia Utami Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, Indonesia.
  • Priscilla Listiyani Computational Virology Research Unit, Molecular Biology and Genetics Division, Generasi Biologi Indonesia Foundation, Gresik Indonesia.
  • Agus Mohammad Hikam Faculty of Mathematics and Natural Sciences, Universitas Islam Malang, Malang, Indonesia.
  • Nelson Chandra Department of Bioinformatics, School of Life Sciences, Indonesia International Institute for Life-Sciences, East Jakarta, Indonesia.
  • Muhammad Badrut Tamam Department of Biology, Faculty of Sciences and Technology, Universitas Muhammadiyah Lamongan, Lamongan, Indonesia
  • Md.Emdad Ullah Department of Chemistry, Mississippi State University, Mississippi State, United States.

Keywords:

Bioactive, HIV-1, In Silico, Moringa oleifera, Reverse Transcriptase

Abstract

Human immunodeficiency virus type 1 (HIV-1) from the retrovirus family can trigger opportunistic diseases of the immune system or AIDS. In these conditions the immune system fails due to infection with bacteria, protozoa, fungi, and other viruses. HIV-1 has several enzymes consisting of reverse transcriptase (RT), integrase (INT), & protease (PR), all of which play an important role in the replication process. Reverse transcriptase plays a role in the formation of HIV-1 cDNA in several stages consisting of lysyl tRNA having a binding site, RT then adds a nucleotide to synthesize cDNA to the non-coding or U5 and R (repeat) region of the viral RNA. RT activity has a crucial role in viral replication and is very likely to be a target in drug design. This study aims to reveal the molecular mechanism of compounds from Moringa oleifera to be antiviral for HIV-1 through a bioinformatics approach. Kaempferitrin and β-sitosterol from Moringa oleifera are predicted to be HIV-1 antiviral agents. Both compounds can produce more negative binding affinity and weak bond interactions. This indicates the stability of the binding interaction that triggers the inhibitory activity.

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Published

2022-12-27

How to Cite

Murtadlo, A. A. A., Wahyuningsih, S., Turista, D. D. R., Wiguna, A., Wijayanti, A., Rachmawati, Y., Dibha, A. F., Hasan, T., Wijaya, R. M., Hafidzhah, M. A., Utami, S. L., Listiyani, P., Hikam, A. M., Chandra, N., Tamam, M. B., & Ullah, M. (2022). Screening of Reverse Transcriptase Inhibitor from Moringa oleifera Bioactive Compound through In Silico Study Againts HIV-1. SAINSTEK International Journal on Applied Science, Advanced Technology and Informatics, 1(02), 46–53. https://doi.org/10.24036/sainstek/vol1-iss02/9

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